miRBase entry: cgr-mir-126b

Stem-loop cgr-mir-126b


Accession
MI0033077
Description
Cricetulus griseus cgr-mir-126b precursor miRNA


Sequence

1709 reads, 27 reads per million, 6 experiments
auuauuacucacgguacgaguuugaagugucacagCGCGUACCAAAAGUAAUAAUGUG
(((((((((...((((((.((((((....))).))).))))))...)))))))))...

Structure
---         cac      a   -   a 
   auuauuacu   gguacg guu uga g
   |||||||||   |||||| ||| |||  
   UAAUAAUGA   CCAUGC Cga acu u
GUG         AAA      G   c   g 


Annotation confidence Not enough data
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Genome context
JH003541.1: 12290-12347 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from cgr-mir-126b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-126b

Accession MIMAT0041148
Description Cricetulus griseus cgr-miR-126b mature miRNA
Sequence 36 - CGCGUACCAAAAGUAAUAAUGUG - 58
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493