miRBase entry: cgr-mir-3074-2

Stem-loop cgr-mir-3074-2


Accession
MI0033089
Description
Cricetulus griseus cgr-mir-3074-2 precursor miRNA


Sequence

467189 reads, 79 reads per million, 6 experiments
gggcuggacuccuGUUCCUGCUGAACUGAGCCAGUgcacuggaaucaacuguuucagcucaguaggcacaggaggcggagccc
(((((...(((((((.((((((((.(((((.((((............)))).))))).)))))))).)))))))....)))))

Structure
     -gga       U        A     C    gcacu 
gggcu    cuccuGU CCUGCUGA CUGAG CAGU     g
|||||    ||||||| |||||||| ||||| ||||      
cccga    gaggaca ggaugacu gacuu guca     g
     ggcg       c        c     u    acuaa 


Annotation confidence Low
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Genome context
JH000286.1: 1078703-1078785 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from cgr-mir-3074-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cgr-miR-3074

Accession MIMAT0041160
Description Cricetulus griseus cgr-miR-3074 mature miRNA
Sequence 14 - GUUCCUGCUGAACUGAGCCAGU - 35
Evidence not_experimental

References

  1. PubMed ID: 25689160
    Annotation of additional evolutionary conserved microRNAs in CHO cells from updated genomic data
    "Diendorfer AB, Hackl M, Klanert G, Jadhav V, Reithofer M, Stiefel F, Hesse F, Grillari J, Borth N"
    "Biotechnol Bioeng (2015) 112:1488-1493