miRBase entry: egr-mir-10241

Stem-loop egr-mir-10241


Accession
MI0033129
Description
Echinococcus granulosus egr-mir-10241 precursor miRNA


Sequence

ggcugUGAAUGGCUAGAGGCAUCAAGgacauccauacauacgguugcccuUGAACCGUUUCUACCAUUCAUAauccu
((.(((((((((.(((((((.((((((.((.((........)).)).))))))...))))))))))))))))..)).

Structure
-  -c         C       --A      a  u  aua 
 gg  ugUGAAUGG UAGAGGC   UCAAGg ca cc   c
 ||  ||||||||| |||||||   |||||| || ||    
 cc  AUACUUACC AUCUUUG   AGUucc gu gg   a
u  ua         -       CCA      c  u  cau 


Annotation confidence Not enough data
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Genome context
APAU02000008.1: 1606466-1606542 [-]

Database links

Mature egr-miR-10241-5p

Accession MIMAT0041225
Description Echinococcus granulosus egr-miR-10241-5p mature miRNA
Sequence 6 - UGAAUGGCUAGAGGCAUCAAG - 26
Evidence experimental
Illumina [1]

Mature egr-miR-10241-3p

Accession MIMAT0041226
Description Echinococcus granulosus egr-miR-10241-3p mature miRNA
Sequence 51 - UGAACCGUUUCUACCAUUCAUA - 72
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736