Stem-loop egr-mir-10255

Accession

MI0033146

Description

Echinococcus granulosus egr-mir-10255 precursor miRNA

Sequence

aggcaUUGAAGGUACUGUGAAUUUUGuaugaguccaaacugguacaAGAUGCCCAUUCGCGCGGUCCAUGccugc
((((((....((..(((((((((((((((.(((....))).)))))))))......))))).)..))))))))..

Structure

--      UGAA  UA -     ------         g   c 
  aggcaU    GG  C UGUGA      AUUUUGuau agu c
  ||||||    ||  | |||||      ||||||||| |||  
  uccGUA    CC  G GCGCU      UAGAacaug uca a
cg      ----  UG C     UACCCG         g   a 

Annotation confidence Not enough data

Genome context

APAU02000028.1: 632782-632856 [-]

Mature egr-miR-10255-5p

• Accession: MIMAT0041259
• Description: Echinococcus granulosus egr-miR-10255-5p mature miRNA
• Sequence: 6 - UUGAAGGUACUGUGAAUUUUG - 26
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10255-3p

• Accession: MIMAT0041260
• Description: Echinococcus granulosus egr-miR-10255-3p mature miRNA
• Sequence: 47 - AGAUGCCCAUUCGCGCGGUCCAUG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736