Stem-loop egr-mir-10259

Accession

MI0033150

Description

Echinococcus granulosus egr-mir-10259 precursor miRNA

Sequence

gacaaAGGGCUAAAGUACAAGAGAGugguaacagCUGCUGUACUUUAGCCCUCCaacca
.....((((((((((((((..((..((....)).))..)))))))))))))).......

Structure

--gacaa              AG  AG  g 
       AGGGCUAAAGUACA  AG  ug u
       ||||||||||||||  ||  ||  
       UCCCGAUUUCAUGU  UC  ac a
accaaCC              CG  -g  a 

Annotation confidence Not enough data

Genome context

APAU02000021.1: 981776-981834 [-]

Mature egr-miR-10259-5p

• Accession: MIMAT0041267
• Description: Echinococcus granulosus egr-miR-10259-5p mature miRNA
• Sequence: 6 - AGGGCUAAAGUACAAGAGAG - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10259-3p

• Accession: MIMAT0041268
• Description: Echinococcus granulosus egr-miR-10259-3p mature miRNA
• Sequence: 35 - CUGCUGUACUUUAGCCCUCC - 54
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736