Stem-loop egr-mir-10260

Accession

MI0033151

Description

Echinococcus granulosus egr-mir-10260 precursor miRNA

Sequence

ugcccCCCGCACUAUGAUUGCCAAACUCcacagcucgcagagaggaagcaucaagaGUUGGCAACGGUAGUGCGAUACaucaa
.......((((((((..(((((((.(((....(((..(.....)..))).....))))))))))..)))))))).........

Structure

--ugcccCC        GA       A   -caca   cg a 
         CGCACUAU  UUGCCAA CUC     gcu  c g
         ||||||||  ||||||| |||     |||  | a
         GCGUGAUG  AACGGUU Gag     cga  g g
aacuaCAUA        GC       -   aacua   ag a 

Annotation confidence Not enough data

Genome context

APAU02000007.1: 940042-940124 [+]

Mature egr-miR-10260-5p

• Accession: MIMAT0041269
• Description: Echinococcus granulosus egr-miR-10260-5p mature miRNA
• Sequence: 6 - CCCGCACUAUGAUUGCCAAACUC - 28
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10260-3p

• Accession: MIMAT0041270
• Description: Echinococcus granulosus egr-miR-10260-3p mature miRNA
• Sequence: 57 - GUUGGCAACGGUAGUGCGAUAC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736