miRBase entry: egr-mir-10263

Stem-loop egr-mir-10263


Accession
MI0033154
Description
Echinococcus granulosus egr-mir-10263 precursor miRNA


Sequence

cuuucaAUUUGCUCUGGGUUAGUAGAAggcauuuuaaaugcacuaCUAAACCAAGAGACAAAUUGAaacac
.((((((((((((((((..((((((...(((((...))))).))))))..)).)))).))))))))))...

Structure
--c          -    -  GU      AAg     u 
   uuucaAUUUG CUCU GG  UAGUAG   gcauu  
   |||||||||| |||| ||  ||||||   ||||| u
   aaAGUUAAAC GAGA CC  AUCauc   cguaa  
cac          A    A  AA      --a     a 


Annotation confidence Not enough data
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Genome context
APAU02000042.1: 460162-460232 [-]

Database links

Mature egr-miR-10263-5p

Accession MIMAT0041275
Description Echinococcus granulosus egr-miR-10263-5p mature miRNA
Sequence 7 - AUUUGCUCUGGGUUAGUAGAA - 27
Evidence experimental
Illumina [1]

Mature egr-miR-10263-3p

Accession MIMAT0041276
Description Echinococcus granulosus egr-miR-10263-3p mature miRNA
Sequence 46 - CUAAACCAAGAGACAAAUUGA - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736