miRBase entry: egr-mir-10264

Stem-loop egr-mir-10264


Accession
MI0033155
Description
Echinococcus granulosus egr-mir-10264 precursor miRNA


Sequence

CUGAUUCGAAACCUCGGCCuuuuuguuacuguucuuuggguuucccuaacaugacucccacugcguaauuagaGGAUUGUUUCGGGUGGGC
((.(((((((((.....(((((..(((((.((....((((..((........))..))))..))))))).)))))...))))))))).)).

Structure
-  G         CUCGG     uu     u  ucuu    uu  ccu 
 CU AUUCGAAAC     CCuuu  guuac gu    uggg  uc   a
 || |||||||||     |||||  ||||| ||    ||||  ||    
 GG UGGGCUUUG     GGaga  uaaug cg    accc  ag   a
C  G         --UUA     -u     -  --uc    uc  uac 


Annotation confidence Not enough data
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Genome context
APAU02000213.1: 78410-78500 [+]

Database links

Mature egr-miR-10264-5p

Accession MIMAT0041277
Description Echinococcus granulosus egr-miR-10264-5p mature miRNA
Sequence 1 - CUGAUUCGAAACCUCGGCC - 19
Evidence experimental
Illumina [1]

Mature egr-miR-10264-3p

Accession MIMAT0041278
Description Echinococcus granulosus egr-miR-10264-3p mature miRNA
Sequence 74 - GGAUUGUUUCGGGUGGGC - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736