miRBase entry: egr-mir-10265

Stem-loop egr-mir-10265


Accession
MI0033156
Description
Echinococcus granulosus egr-mir-10265 precursor miRNA


Sequence

UGUGGGCAAAGUGAGUGGGAUCaaacauuaugucaacauaugaaacauugggaaaUCUCAUGCCUUUGCCCACGAA
(((((((((((.(.(((((((....((.....(((.....))).....))....))))))).))))))))))))..

Structure
--           U A       Caaa  uuaug   a 
  UGUGGGCAAAG G GUGGGAU    ca     uca c
  ||||||||||| | |||||||    ||     ||| a
  GCACCCGUUUC C UACUCUa    gu     agu u
AA           - G       aagg  uacaa   a 


Annotation confidence Not enough data
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Genome context
APAU02000008.1: 1500491-1500566 [-]

Database links

Mature egr-miR-10265-5p

Accession MIMAT0041279
Description Echinococcus granulosus egr-miR-10265-5p mature miRNA
Sequence 1 - UGUGGGCAAAGUGAGUGGGAUC - 22
Evidence experimental
Illumina [1]

Mature egr-miR-10265-3p

Accession MIMAT0041280
Description Echinococcus granulosus egr-miR-10265-3p mature miRNA
Sequence 56 - UCUCAUGCCUUUGCCCACGAA - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736