miRBase entry: egr-mir-10266

Stem-loop egr-mir-10266


Accession
MI0033157
Description
Echinococcus granulosus egr-mir-10266 precursor miRNA


Sequence

CCUCCUUCCUGCUUUUUUUCaccucggugcuguccagcuaacuuguAGGAAAGUGAAGGAGGCA
((((((((..((((((((.((....((((((....)))..))))).))))))))))))))))..

Structure
--        CU        U  ccuc   --   g 
  CCUCCUUC  GCUUUUUU Ca    ggu  gcu u
  ||||||||  |||||||| ||    |||  |||  
  GGAGGAAG  UGAAAGGA gu    uca  cga c
AC        --        u  ----   au   c 


Annotation confidence Not enough data
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Genome context
APAU02000013.1: 333868-333931 [-]

Database links

Mature egr-miR-10266-5p

Accession MIMAT0041281
Description Echinococcus granulosus egr-miR-10266-5p mature miRNA
Sequence 1 - CCUCCUUCCUGCUUUUUUUC - 20
Evidence experimental
Illumina [1]

Mature egr-miR-10266-3p

Accession MIMAT0041282
Description Echinococcus granulosus egr-miR-10266-3p mature miRNA
Sequence 47 - AGGAAAGUGAAGGAGGCA - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736