Stem-loop egr-mir-10269

Accession

MI0033160

Description

Echinococcus granulosus egr-mir-10269 precursor miRNA

Sequence

UGCAUUUCAUCACCUACUCCCAUCAcuuaccgugguggugacacuuucggugugAUGGAUUGAAUAAGAGUGCACA
(((((((............(((((((..((((.((((....))))..))))))))))).........)))))))..

Structure

--       CAUCACCUACUC       uu    -u    g 
  UGCAUUU            CCAUCAc  accg  ggug u
  |||||||            |||||||  ||||  ||||  
  ACGUGAG            GGUAgug  uggc  ucac g
AC       ---AAUAAGUUA       --    uu    a 

Annotation confidence Not enough data

Genome context

APAU02000004.1: 1560918-1560993 [+]

Mature egr-miR-10269-5p

• Accession: MIMAT0041287
• Description: Echinococcus granulosus egr-miR-10269-5p mature miRNA
• Sequence: 1 - UGCAUUUCAUCACCUACUCCCAUCA - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10269-3p

• Accession: MIMAT0041288
• Description: Echinococcus granulosus egr-miR-10269-3p mature miRNA
• Sequence: 55 - AUGGAUUGAAUAAGAGUGCACA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736