miRBase entry: egr-mir-10270

Stem-loop egr-mir-10270


Accession
MI0033161
Description
Echinococcus granulosus egr-mir-10270 precursor miRNA


Sequence

GUAGAUCGUUUGGCGAUAAGCggugaacagugauuuacagUGAAGGCCAAACAUCUACCA
((((((.(((((((.....((.(((((......))))).))....)))))))))))))..

Structure
--      C       GAUAA  g     ca 
  GUAGAU GUUUGGC     GC gugaa  g
  |||||| |||||||     || |||||   
  CAUCUA CAAACCG     Ug cauuu  u
AC      -       -GAAG  a     ag 


Annotation confidence Not enough data
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Genome context
APAU02000009.1: 84655-84714 [+]

Database links

Mature egr-miR-10270-5p

Accession MIMAT0041289
Description Echinococcus granulosus egr-miR-10270-5p mature miRNA
Sequence 1 - GUAGAUCGUUUGGCGAUAAGC - 21
Evidence experimental
Illumina [1]

Mature egr-miR-10270-3p

Accession MIMAT0041290
Description Echinococcus granulosus egr-miR-10270-3p mature miRNA
Sequence 41 - UGAAGGCCAAACAUCUACCA - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25168356
    Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
    Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
    BMC Genomics (2014) 15:736