Stem-loop egr-mir-10272

Accession

MI0033163

Description

Echinococcus granulosus egr-mir-10272 precursor miRNA

Sequence

GAGCGGCUGUUGAACUAGUACCgaccuuugauaauuacccaacagacaguucgugUAUUCAAGUUCAAAUAGCCGCAUUUG
..((((((((((((((((((((((.(((((............)))..)).))).)))))..))))).))))))))).....

Structure

---GA         -     --     -   c  --   auaau 
     GCGGCUGUU GAACU  AGUAC Cga cu  uug     u
     ||||||||| |||||  ||||| ||| ||  |||      
     CGCCGAUAA CUUGA  UUAUg gcu ga  gac     a
GUUUA         A     AC     u   u  ca   aaccc 

Annotation confidence Not enough data

Genome context

APAU02000197.1: 77644-77724 [-]

Mature egr-miR-10272-5p

• Accession: MIMAT0041293
• Description: Echinococcus granulosus egr-miR-10272-5p mature miRNA
• Sequence: 1 - GAGCGGCUGUUGAACUAGUACC - 22
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10272-3p

• Accession: MIMAT0041294
• Description: Echinococcus granulosus egr-miR-10272-3p mature miRNA
• Sequence: 56 - UAUUCAAGUUCAAAUAGCCGCAUUUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736