Stem-loop egr-mir-10281

Accession

MI0033172

Description

Echinococcus granulosus egr-mir-10281 precursor miRNA

Sequence

UUUCAUCACCCUACCAGAUUGCUCUuauucuuuaguuggagcuuaagcaucagcuuuggaGGUACCCUCAUGGGUGUGAAUUA
.((((.(((((....((..((((.....(((..((((((.((....)).))))))..)))))))..))...)))))))))...

Structure

--U    U     UACC  AU    CUuau   uu      a  u 
   UUCA CACCC    AG  UGCU     ucu  aguugg gc u
   |||| |||||    ||  ||||     |||  |||||| ||  
   AAGU GUGGG    UC  AUGG     agg  ucgacu cg a
AUU    -     -UAC  CC    -----   uu      a  a 

Annotation confidence Not enough data

Genome context

APAU02000008.1: 1820633-1820715 [-]

Mature egr-miR-10281-5p

• Accession: MIMAT0041311
• Description: Echinococcus granulosus egr-miR-10281-5p mature miRNA
• Sequence: 1 - UUUCAUCACCCUACCAGAUUGCUCU - 25
• Evidence: experimental ; Illumina [1]

Mature egr-miR-10281-3p

• Accession: MIMAT0041312
• Description: Echinococcus granulosus egr-miR-10281-3p mature miRNA
• Sequence: 61 - GGUACCCUCAUGGGUGUGAAUUA - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25168356
   Genome-wide sequencing of small RNAs reveals a tissue-specific loss of conserved microRNA families in Echinococcus granulosus
   Bai Y, Zhang Z, Jin L, Kang H, Zhu Y, Zhang L, Li X, Ma F, Zhao L, Shi B, Li J, McManus DP, Zhang W, Wang S
   BMC Genomics (2014) 15:736