miRBase entry: tcf-mir-317

Stem-loop tcf-mir-317


Accession
MI0033239
Description
Triops cancriformis tcf-mir-317 precursor miRNA


Sequence

cgggagccacccugaguucacuuggacuugaaaagUGAACACAGCUGGUGGUAUCU
.(((.(((((((((.((((((((.........)))))))).)))..)))))).)))

Structure
c   a      --   a        gga 
 ggg gccacc  cug guucacuu   c
 ||| ||||||  ||| ||||||||   u
 UCU UGGUGG  GAC CAAGUgaa   u
-   A      UC   A        aag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-317

Accession MIMAT0041406
Description Triops cancriformis tcf-miR-317 mature miRNA
Sequence 36 - UGAACACAGCUGGUGGUAUCU - 56
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242