miRBase entry: tcf-mir-750

Stem-loop tcf-mir-750


Accession
MI0033242
Description
Triops cancriformis tcf-mir-750 precursor miRNA


Sequence

aguuggaaguggggaucuaggcaccugcaacuugcucacaauuucgcaaagcuuuccuucaacucguugcugaaagagcuuugcugaaaucgugCCAGAUCUAUCUCUUCCAGCUCA
(((((((((.((((((((.(((((..(((...))).....(((((((((((((((..((((.(.....).)))))))))))))).))))).))))))))))).)).)))))))))..

Structure
--         u  -      a     cugcaacuugcucaca     -          cc    a u 
  aguuggaag gg ggaucu ggcac                auuuc gcaaagcuuu  uuca c c
  ||||||||| || |||||| |||||                ||||| ||||||||||  |||| | g
  UCGACCUUC CU UCUAGA CCgug                uaaag cguuucgaga  aagu g u
AC         U  A      -     ---------------c     u          --    c u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tcf-miR-750

Accession MIMAT0041409
Description Triops cancriformis tcf-miR-750 mature miRNA
Sequence 95 - CCAGAUCUAUCUCUUCCAGCUCA - 117
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25525151
    Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
    "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
    "RNA (2015) 21:230-242