Stem-loop tcf-mir-1175

Accession

MI0033249

Description

Triops cancriformis tcf-mir-1175 precursor miRNA

Sequence

AAGUGGAGCAGUAGUCUCGUCACUuggauacuuagcaagUGAGAUUCAACUCCUCCAACUUUG
((((((((.(((.(..((.(((((((.........)))))))))..).))).)))).))))..

Structure

--    -    C   A UC  G       gau 
  AAGU GGAG AGU G  UC UCACUug   a
  |||| |||| ||| |  || |||||||   c
  UUCA CCUC UCA C  AG AGUgaac   u
GU    A    C   A UU  -       gau 

Annotation confidence Not enough data

Genome context

Unknown

Mature tcf-miR-1175-5p

• Accession: MIMAT0041417
• Description: Triops cancriformis tcf-miR-1175-5p mature miRNA
• Sequence: 1 - AAGUGGAGCAGUAGUCUCGUCACU - 24
• Evidence: experimental ; Illumina [1]

Mature tcf-miR-1175-3p

• Accession: MIMAT0041418
• Description: Triops cancriformis tcf-miR-1175-3p mature miRNA
• Sequence: 40 - UGAGAUUCAACUCCUCCAACUUUG - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25525151
   Identification, expression, and molecular evolution of microRNAs in the ""living fossil"" Triops cancriformis (tadpole shrimp)
   "Ikeda KT, Hirose Y, Hiraoka K, Noro E, Fujishima K, Tomita M, Kanai A"
   "RNA (2015) 21:230-242