Stem-loop aga-mir-2945

Accession

MI0033348

Description

Anopheles gambiae aga-mir-2945 precursor miRNA

Literature search

2 open access papers mention aga-mir-2945
(3 sentences)

Sequence

AGCGAGUCUGCACUCUGGAAUAACaugucggauucguauacucaUGACUAGAGGCAGACUCGUUUG
.((((((((((.((((((.......(((((....)).))).......))))))))))))))))...

Structure

--A          A      AAUAACa   -  g 
   GCGAGUCUGC CUCUGG       ugu cg a
   |||||||||| ||||||       ||| ||  
   UGCUCAGACG GAGAUC       aua gc u
GUU          -      AGUacuc   u  u 

Annotation confidence Not enough data

Genome context

chr3R: 10314332-10314397 [-]

Mature aga-miR-2945-5p

• Accession: MIMAT0041515
• Description: Anopheles gambiae aga-miR-2945-5p mature miRNA
• Sequence: 1 - AGCGAGUCUGCACUCUGGAAUAAC - 24
• Evidence: experimental ; Illumina [1]

Mature aga-miR-2945-3p

• Accession: MIMAT0041516
• Description: Anopheles gambiae aga-miR-2945-3p mature miRNA
• Sequence: 45 - UGACUAGAGGCAGACUCGUUUG - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25766668
   The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
   Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
   BMC Genomics (2015) 16:100