Stem-loop sequence aga-mir-10378

Accession

MI0033387 (change log)

Description

Anopheles gambiae miR-10378 stem-loop

Literature search

1 open access papers mention aga-mir-10378
(1 sentences)

Stem-loop

         a   gu            uu      ag  guuucgcacuag 
5' ccggug ucg  uucgugguacuc  guggua  ga            c
   |||||| |||  ||||||||||||  ||||||  ||            g
3' ggucac ggc  aaguaccaugag  uacuau  cu            g
         -   ug            uu      cu  acgaaccacggc 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (AgamP3; GCA_000005575.1): chr2R: 18852626-18852723 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0033387

Mature sequence aga-miR-10378-5p

• Accession: MIMAT0041582
• Sequence: 15 - cgugguacucuugugguaagg - 35
• Evidence: experimental; Illumina [1]

Mature sequence aga-miR-10378-3p

• Accession: MIMAT0041583
• Sequence: 66 - ucuaucauuugaguaccauga - 86
• Evidence: experimental; Illumina [1]

References

1. PMID:25766668 "The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs" Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T BMC Genomics. 16:100(2015).