miRBase entry: aga-mir-10379

Stem-loop aga-mir-10379


Accession
MI0033388
Description
Anopheles gambiae aga-mir-10379 precursor miRNA


Sequence

ucaaugacgccaACUGUUUUGUUCGUUGUUCUCAcauauuucguuugUGGAAGAACGAACAAGACUGUAgaugucauuga
(((((((((.(.((.((((((((((((.(((.((((.........))))))).)))))))))))).)).).)))))))))

Structure
         c a  U            G   U    uau 
ucaaugacg c AC GUUUUGUUCGUU UUC CAca   u
||||||||| | || |||||||||||| ||| ||||   u
aguuacugu g UG CAGAACAAGCAA AAG GUgu   c
         a A  U            G   -    uug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chrX: 7417600-7417679 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from aga-mir-10379
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aga-miR-10379-5p

Accession MIMAT0041584
Description Anopheles gambiae aga-miR-10379-5p mature miRNA
Sequence 13 - ACUGUUUUGUUCGUUGUUCUCA - 34
Evidence experimental
Illumina [1]

Mature aga-miR-10379-3p

Accession MIMAT0041585
Description Anopheles gambiae aga-miR-10379-3p mature miRNA
Sequence 48 - UGGAAGAACGAACAAGACUGUA - 69
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25766668
    The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs
    Castellano L, Rizzi E, Krell J, Di Cristina M, Galizi R, Mori A, Tam J, De Bellis G, Stebbing J, Crisanti A, Nolan T
    BMC Genomics (2015) 16:100