miRBase entry: hsa-mir-10396a

Stem-loop hsa-mir-10396a


Accession
MI0033420
Description
Homo sapiens hsa-mir-10396a precursor miRNA


Sequence

931 reads, 134 reads per million, 56 experiments
GGCGGGGCUCGGAGCCGGGcuucggccgGGCCCCGGGCCCUCGACCGGG
((((((((((((.(((.(((....))).))).)))))))).)).))...

Structure
---  -  -        A   G   u 
   GG CG GGGCUCGG GCC GGc u
   || || |||||||| ||| |||  
   CC GC CCCGGGCC CGG ccg c
GGG  A  U        C   g   g 


Annotation confidence Not enough data
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Genome context
chr21: 8987617-8987665 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-10396a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-10396a-5p

Accession MIMAT0041623
Description Homo sapiens hsa-miR-10396a-5p mature miRNA
Sequence 1 - GGCGGGGCUCGGAGCCGGG - 19
Evidence experimental
Illumina [1]

Mature hsa-miR-10396a-3p

Accession MIMAT0041624
Description Homo sapiens hsa-miR-10396a-3p mature miRNA
Sequence 29 - GGCCCCGGGCCCUCGACCGGG - 49
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25723320
    Comprehensive miRNA sequence analysis reveals survival differences in diffuse large B-cell lymphoma patients
    "Lim EL, Trinh DL, Scott DW, Chu A, Krzywinski M, Zhao Y, Robertson AG, Mungall AJ, Schein J, Boyle M, Mottok A, Ennishi D, Johnson NA, Steidl C, Connors JM, Morin RD, Gascoyne RD, Marra MA"
    "Genome Biol (2015) 16:18