miRBase entry: gma-MIR10422

Stem-loop gma-MIR10422


Accession
MI0033461
Description
Glycine max gma-MIR10422 precursor miRNA


Sequence

uguuguuggugguguuguuuuuuuaaucagaauuguaguuuuacuucaauaaucugcauaauaaagguauacaagggauuacgaagauaaaacuccaaUUCUGAUUAGAGAGCAACACCaauaacacuu
...(((((.((((((((((((((.(((((((((((.(((((((((((..((((((.....(((....))).....)))))).)))).))))))).))))))))))))))))))))))))).)))))...

Structure
ugu     g              u           u       -    aa      gcaua   a 
   uguug ugguguuguuuuuu aaucagaauug aguuuua cuuc  uaaucu     aua a
   ||||| |||||||||||||| ||||||||||| ||||||| ||||  ||||||     |||  
   acaau aCCACAACGAGAGA UUAGUCUUaac ucaaaau gaag  auuagg     uau g
uuc     a              -           c       a    -c      gaaca   g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr6: 27463074-27463202 [+]

Database links

Mature gma-miR10422

Accession MIMAT0041669
Description Glycine max gma-miR10422 mature miRNA
Sequence 99 - UUCUGAUUAGAGAGCAACACC - 119
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562