Stem-loop sequence gma-MIR399m

Accession

MI0033473 (change log)

Description

Glycine max miR399m stem-loop

Literature search

14 open access papers mention gma-MIR399m
(86 sentences)

Stem-loop

   au    aau     uc       c        aaa   uc    --         u 
5'   cagc   agggc  cucucuc uggcaugu   cug  auua  uuuugguag u
     ||||   |||||  ||||||| ||||||||   |||  ||||  |||||||||  
3'   gucg   ucccg  gagaggg accguaca   gau  ugau  aaaaccauc u
   uc    guu     uu       a        -ac   ua    ug         c 

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (Glycine_max_v2.0; GCA_000004515.3): chr10: 46849030-46849140 [+]
• Overlapping transcripts:

  intergenic

Clustered miRNAs

< 10kb from gma-MIR399m

• gma-MIR399a: chr10: 46844955-46845048 [+]
• gma-MIR399m: chr10: 46849030-46849140 [+]

Database links

• miRBase Tracker:MI0033473

Mature sequence gma-miR399m

• Accession: MIMAT0041681
• Sequence: 11 - gggcuccucucuccuggcaug - 31
• Evidence: experimental; Illumina [1]

References

1. PMID:25747880 "Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean" Zhao M, Meyers BC, Cai C, Xu W, Ma J Plant Cell. 27:546-562(2015).