miRBase entry: gma-MIR10406b

Stem-loop gma-MIR10406b


Accession
MI0033477
Description
Glycine max gma-MIR10406b precursor miRNA


Sequence

gacacugcucaugaauuauauaauacccaagaccucacaccucuuuucaaacacgucuaacauauugcgcuacaauuuaacaccucagauuucuagcuuggaaccauacacuuucuuuuuaacaccucacacaaacauuuuucuuaagguaagcauCAGUCGAGUUAUUGUAUAAUUCACaauucauaac
...........((((((((((((((....((((.....................)))).....((((.....)))).......(((.((((....((((...(((..........................................)))))))...))))))).))))))))))))))...........

Structure
gacacugcuca              cccaagaccucacaccucuuuucaaacacgucuaacauauugcgcuacaauuuaacac   a    ucua    gga   auacacuuucuuuuuaacac 
           ugaauuauauaaua                                                          cuc gauu    gcuu   acc                    c
           ||||||||||||||                                                          ||| ||||    ||||   |||                     
           ACUUAAUAUGUUAU                                                          GAG CUGA    cgaa   ugg                    u
caauacuuaaC              ---------------------------------------------------------U   -    -Cua    ---   aauucuuuuuacaaacacac 


Annotation confidence Not enough data
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Genome context
chr10: 35380775-35380964 [-]

Database links

Mature gma-miR10406b

Accession MIMAT0041685
Description Glycine max gma-miR10406b mature miRNA
Sequence 157 - CAGUCGAGUUAUUGUAUAAUUCAC - 180
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562