miRBase entry: gma-MIR10424b

Stem-loop gma-MIR10424b


Accession
MI0033481
Description
Glycine max gma-MIR10424b precursor miRNA


Sequence

acuuauuuuuagucucuaauagauuaacaaauuuaguguuuauuccauaauaaauauuucucauuuguuauugauacauugauacagacaaauaaaauuuacuaauuuauuaaaaagcaaacacaaaaUUUUCUAAUUUAUUAGGGACUaaaauaaaau
......((((((((((((((((((((..((((((.((((((......((((((((((((...((((((((((((....)))))...))))))).))))......))))))))......)))))).))))))..))))))))))))))))))))......

Structure
acuuau                    ac      a      auucca        ------    cuc       ---     u 
      uuuuagucucuaauagauua  aaauuu guguuu      uaauaaau      auuu   auuuguu   auuga a
      ||||||||||||||||||||  |||||| ||||||      ||||||||      ||||   |||||||   |||||  
      aaaaUCAGGGAUUAUUUAAU  UUUaaa cacaaa      auuauuua      uaaa   uaaacag   uaguu c
uaaaau                    CU      a      cgaaaa        aucauu    --a       aca     a 


Annotation confidence Not enough data
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Genome context
chr12: 5112032-5112190 [+]

Database links

Mature gma-miR10424b

Accession MIMAT0041689
Description Glycine max gma-miR10424b mature miRNA
Sequence 129 - UUUUCUAAUUUAUUAGGGACU - 149
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562