miRBase entry: gma-MIR10434

Stem-loop gma-MIR10434


Accession
MI0033494
Description
Glycine max gma-MIR10434 precursor miRNA


Sequence

cggcgucguccagguauuagaugcauacucaguggauuuaauuacuuaguuuguuuuucuguuaucacauuauuacuauaagugugaauucagcauuuaauuaauugauuaauuaaguCUACUGAUUAUAUAUCUGAUACCAGgaguuugaag
...((...(((.(((((((((((.(((.((((((((((((((((.((((((.(((...(((...(((((((.........)))))))...))).....))).)))))).)))))))))))))))).))).))))))))))).)))...))...

Structure
cgg  ucg   a           c   c                c      u   --uuu   uua       auu 
   cg   ucc gguauuagaug aua ucaguggauuuaauua uuaguu guu     cug   ucacauu   a
   ||   ||| ||||||||||| ||| |||||||||||||||| |||||| |||     |||   |||||||   c
   gu   agG CCAUAGUCUAU UAU AGUCAUCugaauuaau aguuaa uaa     gac   aguguga   u
gaa  uug   A           A   U                u      u   uuuac   uua       aua 


Annotation confidence Not enough data
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Genome context
chr15: 12973930-12974082 [+]

Database links

Mature gma-miR10434

Accession MIMAT0041702
Description Glycine max gma-miR10434 mature miRNA
Sequence 119 - CUACUGAUUAUAUAUCUGAUACCAG - 143
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562