miRBase entry: gma-MIR10186l

Stem-loop gma-MIR10186l


Accession
MI0033512
Description
Glycine max gma-MIR10186l precursor miRNA


Sequence

uuuagucaccgaaguuuauauuuuaauucucaaacuaucucuacuguuaaauuuguuuaacuaauggaguuaaaaaaauuuaacggcagagacuUUUUGGGAAUUAAAAUGUAAACUUaagggauuaa
.((((((.((.(((((((((((((((((((((((...(((((.(((((((((((.(((((((.....))))))).))))))))))).)))))...)))))))))))))))))))))))..))))))))

Structure
u      a  -g                       cua     a           g       a 
 uuaguc cc  aaguuuauauuuuaauucucaaa   ucucu cuguuaaauuu uuuaacu a
 |||||| ||  |||||||||||||||||||||||   ||||| ||||||||||| ||||||| u
 aauuag gg  UUCAAAUGUAAAAUUAAGGGUUU   agaga ggcaauuuaaa aaauuga g
-      -  aa                       Uuc     c           a       g 


Annotation confidence Not enough data
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Genome context
chr19: 27924141-27924268 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from gma-MIR10186l
Name Accession Chromosome Start End Strand Confidence




Database links

Mature gma-miR10186l

Accession MIMAT0041720
Description Glycine max gma-miR10186l mature miRNA
Sequence 95 - UUUUGGGAAUUAAAAUGUAAACUU - 118
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562