miRBase entry: gma-MIR10447

Stem-loop gma-MIR10447


Accession
MI0033519
Description
Glycine max gma-MIR10447 precursor miRNA


Sequence

uauuguagguggcugcgacguggaaaucaacauauuggcaaugaugaucuuagaguuuuccgucgcaaauuggaucuaaugaaacaacaugagguaagaacaucguaauguaaugguuaaaugaaauuuuaauauguuauguuugauugaaaauugacaaguguguuguuauaugcaguuugucugggaaccauacacaacaauugugauggcagcguugccuccaauuugugugguuggaaguguagucugguuugcgguggugccacugauuUGUUUCCAUGUUGUUGAGUGACaccaaccuga
....((.(((((((((((((((((((.(((.....(((((...................((((((((((((((((((.(((......))).))........((((.((((((((.((((((......))))))..))))))))))))........(((((((((((......))))).))))))....(((((((((....(((((.((.((((....)))))))))))))))))))).........))))))))))))))))))))).....)))))))))))))))..)))..)))).))....

Structure
uauu  a    --   --            u   cauau     augaugaucuuagaguuuu                cuaaugaaacaacaugagguaagaacaucguaauguaaugguuaaaugaaauuuuaauauguuauguuugauugaaaauugacaaguguguuguuauaugcaguuugucuggg         caac     u  u    g 
    gu ggug  gcu  gcgacguggaaa caa     uggca                   ccgucgcaaauuggau                                                                                                                 aaccauaca    aauug ga ggca c
    || ||||  |||  |||||||||||| |||     |||||                   ||||||||||||||||                                                                                                                 |||||||||    ||||| || ||||  
    ca ccaC  UGA  UGUUGUACCUUU GUu     accgu                   gguggcguuuggucug                                                                                                                 uuggugugu    uuaac cu ccgu g
aguc  a    AG   GU            -   uaguc     -------------------                --------------------------------------------------------------------------------------------------------augugaagg         ----     -  -    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr20: 33668881-33669186 [-]

Database links

Mature gma-miR10447

Accession MIMAT0041727
Description Glycine max gma-miR10447 mature miRNA
Sequence 275 - UGUUUCCAUGUUGUUGAGUGAC - 296
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25747880
    Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
    "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
    "Plant Cell (2015) 27:546-562