Stem-loop emu-mir-36a

Accession

MI0033527

Description

Echinococcus multilocularis emu-mir-36a precursor miRNA

Sequence

ACGGAUUGUCCAUCCGGUAACCgcgauaaggugaaggccuuuuuaacugcuggUCACCGGGUAGACAUUCCUUGC
..(((.((((.(((((((.((((((..(((((....)))))......))).))).))))))).)))).)))....

Structure

--AC   U    C       A   -   ----au     g 
    GGA UGUC AUCCGGU ACC gcg      aaggu a
    ||| |||| ||||||| ||| |||      |||||  
    CCU ACAG UGGGCCA Ugg cgu      uuccg a
CGUU   U    A       C   u   caauuu     g 

Annotation confidence Not enough data

Genome context

scaffold_007763: 1144746-1144820 [+]

Mature emu-miR-36a-5p

• Accession: MIMAT0041740
• Description: Echinococcus multilocularis emu-miR-36a-5p mature miRNA
• Sequence: 1 - ACGGAUUGUCCAUCCGGUAACC - 22
• Evidence: experimental ; Illumina [1]

Mature emu-miR-36a-3p

• Accession: MIMAT0041741
• Description: Echinococcus multilocularis emu-miR-36a-3p mature miRNA
• Sequence: 54 - UCACCGGGUAGACAUUCCUUGC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267