Stem-loop emu-mir-61

Accession

MI0033529

Description

Echinococcus multilocularis emu-mir-61 precursor miRNA

Sequence

CGUGAGGCCCUUUCUUGUGCAUGgauaaugaagggucuuuaaaccucgaccaUGACUAGAAAGAGCACUCACAUC
.(((((((.((((((.((.(((((....(((.((.........))))).))))))).)))))).)).)))))...

Structure

--C     -  C      U  G     auaa   a  guc 
   GUGAG GC CUUUCU GU CAUGg    uga gg   u
   ||||| || |||||| || |||||    ||| ||   u
   CACUC CG GAAAGA CA GUacc    gcu cc   u
CUA     A  A      U  -     ---a   -  aaa 

Annotation confidence Not enough data

Genome context

scaffold_007780: 6291387-6291461 [-]

Mature emu-miR-61-5p

• Accession: MIMAT0041744
• Description: Echinococcus multilocularis emu-miR-61-5p mature miRNA
• Sequence: 1 - CGUGAGGCCCUUUCUUGUGCAUG - 23
• Evidence: experimental ; Illumina [1]

Mature emu-miR-61-3p

• Accession: MIMAT0041745
• Description: Echinococcus multilocularis emu-miR-61-3p mature miRNA
• Sequence: 53 - UGACUAGAAAGAGCACUCACAUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267