miRBase entry: emu-mir-133

Stem-loop emu-mir-133


Accession
MI0033530
Description
Echinococcus multilocularis emu-mir-133 precursor miRNA


Sequence

GGCUGAUUUGUGGGGCUCAGAAaagcuguaaaugaaaacuuUUGGUCCCCAUUAACCAGCCGCC
(((((.((.((((((.((((((.................)))))).)))))).)).)))))...

Structure
---     A  U      C      aagcugu 
   GGCUG UU GUGGGG UCAGAA       a
   ||||| || |||||| ||||||       a
   CCGAC AA UACCCC GGUUuu       a
CCG     C  U      U      caaaagu 


Annotation confidence Not enough data
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Genome context
scaffold_007760: 1210020-1210083 [+]

Database links

Mature emu-miR-133-5p

Accession MIMAT0041746
Description Echinococcus multilocularis emu-miR-133-5p mature miRNA
Sequence 1 - GGCUGAUUUGUGGGGCUCAGAA - 22
Evidence experimental
Illumina [1]

Mature emu-miR-133-3p

Accession MIMAT0041747
Description Echinococcus multilocularis emu-miR-133-3p mature miRNA
Sequence 42 - UUGGUCCCCAUUAACCAGCCGCC - 64
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25659494
    High-throughput characterization of Echinococcus spp. metacestode miRNomes
    "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
    "Int J Parasitol (2015) 45:253-267