Stem-loop emu-mir-3479b

Accession

MI0033536

Description

Echinococcus multilocularis emu-mir-3479b precursor miRNA

Sequence

UGGCGGUGCGCGGUGCAAUUUCUGuuaacccgcuuucuugagugcaGAUUGCACUACCCAUCGCCCACa
.(((((((.(.(((((((..(((((......((((....)))))))))))))))).).)))))))....

Structure

---U       C C       UU     uaaccc    u 
    GGCGGUG G GGUGCAA  UCUGu      gcuu c
    ||||||| | |||||||  |||||      ||||  
    CCGCUAC C UCACGUU  AGacg      ugag u
aCAC       C A       --     ------    u 

Annotation confidence Not enough data

Genome context

contig_62349: 2030666-2030734 [-]

Mature emu-miR-3479b-5p

• Accession: MIMAT0041758
• Description: Echinococcus multilocularis emu-miR-3479b-5p mature miRNA
• Sequence: 1 - UGGCGGUGCGCGGUGCAAUUUCUG - 24
• Evidence: experimental ; Illumina [1]

Mature emu-miR-3479b-3p

• Accession: MIMAT0041759
• Description: Echinococcus multilocularis emu-miR-3479b-3p mature miRNA
• Sequence: 47 - GAUUGCACUACCCAUCGCCCAC - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25659494
   High-throughput characterization of Echinococcus spp. metacestode miRNomes
   "Cucher M, Macchiaroli N, Kamenetzky L, Maldonado L, Brehm K, Rosenzvit MC"
   "Int J Parasitol (2015) 45:253-267