miRBase entry: sfr-mir-10461a

Stem-loop sfr-mir-10461a


Accession
MI0033552
Description
Spodoptera frugiperda sfr-mir-10461a precursor miRNA


Sequence

uuugaCGAGGACUGGACUAGUGUCAaguaaugcuagagggucgugcucauuaguagcauuccccaacacguggaaugcugcuuauaaauaugauccucuaguaagacuugacACUAGUCGAGUUUCUCGUCaaa
.((((((((((((.((((((((((((((..(((((((((((((((......((((((((((((......).)))))))))))......)))))))))))))))..)))))))))))))).)).)))))))))).

Structure
u          -  G              aa               cucauu           - ca 
 uugaCGAGGA CU GACUAGUGUCAagu  ugcuagagggucgug      aguagcauucc c  a
 |||||||||| || ||||||||||||||  |||||||||||||||      ||||||||||| |   
 aaCUGCUCUU GA CUGAUCAcaguuca  augaucuccuaguau      ucgucguaagg g  c
a          U  G              ga               aaauau           u ca 


Annotation confidence Not enough data
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Genome context
JQCY02003420.1: 17841-17974 [-]

Database links

Mature sfr-miR-10461a-5p

Accession MIMAT0041788
Description Spodoptera frugiperda sfr-miR-10461a-5p mature miRNA
Sequence 6 - CGAGGACUGGACUAGUGUCA - 25
Evidence experimental
Illumina [1]

Mature sfr-miR-10461a-3p

Accession MIMAT0041789
Description Spodoptera frugiperda sfr-miR-10461a-3p mature miRNA
Sequence 113 - ACUAGUCGAGUUUCUCGUC - 131
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988