miRBase entry: sfr-mir-10454b

Stem-loop sfr-mir-10454b


Accession
MI0033553
Description
Spodoptera frugiperda sfr-mir-10454b precursor miRNA


Sequence

aucaggggccuuagucugcUAUUACAAUUGUGUCGGAAUggucgaucauugaucauugcaagaggggcggagcuauguagguuguauagcucugucccucuugcacugcucaaugucgacCAUUCUGACACAAUUGUAAUagcagacuaaggccccugau
(((((((((((((((((((((((((((((((((((((((((((((.((((((.((.(((((((((((((((((((((.......))))))))))))))))))))).)).)))))))))))))))))))))))))))))))))))))))))))))))))))

Structure
                                             u      u  u                     ua 
aucaggggccuuagucugcUAUUACAAUUGUGUCGGAAUggucga cauuga ca ugcaagaggggcggagcuaug  g
||||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||||||||||||  g
uaguccccggaaucagacgaUAAUGUUAACACAGUCUUACcagcu guaacu gu acguucucccugucucgauau  u
                                             -      c  c                     gu 


Annotation confidence Not enough data
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Genome context
JQCY02025556.1: 253-412 [-]

Database links

Mature sfr-miR-10454b-5p

Accession MIMAT0041790
Description Spodoptera frugiperda sfr-miR-10454b-5p mature miRNA
Sequence 20 - UAUUACAAUUGUGUCGGAAU - 39
Evidence experimental
Illumina [1]

Mature sfr-miR-10454b-3p

Accession MIMAT0041791
Description Spodoptera frugiperda sfr-miR-10454b-3p mature miRNA
Sequence 121 - CAUUCUGACACAAUUGUAAU - 140
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988