miRBase entry: sfr-mir-10462-2

Stem-loop sfr-mir-10462-2


Accession
MI0033556
Description
Spodoptera frugiperda sfr-mir-10462-2 precursor miRNA


Sequence

cccuaaaacaagaauauaaGAAUUUAAGCAGUCGGGACCcauucuaaauauuaugaauuaugacuuucuagaAUGGGUCCCGACUGCUUAAAUucuuauauucuuguuuuaggg
((((((((((((((((((((((((((((((((((((((((((((((((..(((((...)))))..)).))))))))))))))))))))))))))))))))))))))))))))))

Structure
                                              -  ua     a 
cccuaaaacaagaauauaaGAAUUUAAGCAGUCGGGACCcauucua aa  uuaug  
|||||||||||||||||||||||||||||||||||||||||||||| ||  ||||| a
gggauuuuguucuuauauucuUAAAUUCGUCAGCCCUGGGUAagau uu  aguau  
                                              c  uc     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JQCY02004987.1: 2335-2448 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from sfr-mir-10462-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature sfr-miR-10462-5p

Accession MIMAT0041794
Description Spodoptera frugiperda sfr-miR-10462-5p mature miRNA
Sequence 20 - GAAUUUAAGCAGUCGGGACC - 39
Evidence experimental
Illumina [1]

Mature sfr-miR-10462-3p

Accession MIMAT0041795
Description Spodoptera frugiperda sfr-miR-10462-3p mature miRNA
Sequence 73 - AUGGGUCCCGACUGCUUAAAU - 93
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988