miRBase entry: sfr-mir-10464

Stem-loop sfr-mir-10464


Accession
MI0033558
Description
Spodoptera frugiperda sfr-mir-10464 precursor miRNA


Sequence

gACACGACUGCAAUAGAACUGcaaaucaaacgugcgguccgauuguaguugaauugcagucggugugcaguucacauaaugcuaggcugcacgguuggcuugCAGUACCAUUGCAGUCGUGUC
((((((((((((((.(.(((((((.(((..(((((((((..(((((.((.((((((((.......)))))))))))))))....)))))))))..))).))))))).).))))))))))))))

Structure
              A A       a   aa         --cg     a  u        gu 
gACACGACUGCAAU G ACUGcaa uca  cgugcgguc    auugu gu gaauugca  c
|||||||||||||| | ||||||| |||  |||||||||    ||||| || ||||||||  g
CUGUGCUGACGUUA C UGACguu ggu  gcacgucgg    uaaua ca cuugacgu  g
              C A       c   ug         aucg     -  -        gu 


Annotation confidence Not enough data
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Genome context
JQCY02009733.1: 14542-14664 [+]

Database links

Mature sfr-miR-10464-5p

Accession MIMAT0041798
Description Spodoptera frugiperda sfr-miR-10464-5p mature miRNA
Sequence 2 - ACACGACUGCAAUAGAACUG - 21
Evidence experimental
Illumina [1]

Mature sfr-miR-10464-3p

Accession MIMAT0041799
Description Spodoptera frugiperda sfr-miR-10464-3p mature miRNA
Sequence 103 - CAGUACCAUUGCAGUCGUGUC - 123
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988