miRBase entry: sfr-mir-10461b

Stem-loop sfr-mir-10461b


Accession
MI0033583
Description
Spodoptera frugiperda sfr-mir-10461b precursor miRNA


Sequence

ggcuuacucacguaacuguuUGACGAGGAACUCUACUACUUccaagccaugcuaaaggcucauauucaugagcagcauuccgcgacacacgacgcggcgauugucgcuauuacugagccucuagcauggcuUGAAACUAGUCGAGUUCCUCaucaaacaguuacgugaguaagcc
(((((((((((((((((((((((.(((((((((.((((.((.((((((((((((.(((((((........(((.(((..(((((........)))))....))).))).....))))))).)))))))))))).)).)))).))))))))).)))))))))))))))))))))))

Structure
                       C         U    C  c            a       uauucaug   a   --uu     aca 
ggcuuacucacguaacuguuUGA GAGGAACUC ACUA UU caagccaugcua aggcuca        agc gca    ccgcg   c
||||||||||||||||||||||| ||||||||| |||| || |||||||||||| |||||||        ||| |||    |||||    
ccgaaugagugcauugacaaacu CUCCUUGAG UGAU AA GUucgguacgau uccgagu        ucg ugu    ggcgc   a
                       a         C    C  A            c       ---cauua   c   uagc     agc 


Annotation confidence Not enough data
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Genome context
JQCY02007868.1: 7465-7639 [-]

Database links

Mature sfr-miR-10461b-5p

Accession MIMAT0041847
Description Spodoptera frugiperda sfr-miR-10461b-5p mature miRNA
Sequence 21 - UGACGAGGAACUCUACUACUU - 41
Evidence experimental
Illumina [1]

Mature sfr-miR-10461b-3p

Accession MIMAT0041848
Description Spodoptera frugiperda sfr-miR-10461b-3p mature miRNA
Sequence 132 - UGAAACUAGUCGAGUUCCUC - 151
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988