miRBase entry: sfr-mir-10508a-1

Stem-loop sfr-mir-10508a-1


Accession
MI0033647
Description
Spodoptera frugiperda sfr-mir-10508a-1 precursor miRNA


Sequence

AAACUCGAGUCGUCAGUAGCagcgcgacaaucgccgugucgugugucgcggAAUGCUCCUCAUGAAUAUGAg
...((((..((((.((.((((.(((((((..((......))..)))))))...)))).)).))))...))))

Structure
AAA    -AG    C  U    --g       au  cc 
   CUCG   UCGU AG AGCa   cgcgaca  cg  g
   ||||   |||| || ||||   |||||||  ||   
   gAGU   AGUA UC UCGU   gcgcugu  gc  u
---    AUA    C  C    AAg       gu  ug 


Annotation confidence Not enough data
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Genome context
JQCY02005172.1: 37-108 [+]

Database links

Mature sfr-miR-10508a-5p

Accession MIMAT0041958
Description Spodoptera frugiperda sfr-miR-10508a-5p mature miRNA
Sequence 1 - AAACUCGAGUCGUCAGUAGC - 20
Evidence experimental
Illumina [1]

Mature sfr-miR-10508a-3p

Accession MIMAT0041959
Description Spodoptera frugiperda sfr-miR-10508a-3p mature miRNA
Sequence 52 - AAUGCUCCUCAUGAAUAUGA - 71
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25693181
    Identification and characteristics of microRNAs from army worm, Spodoptera frugiperda cell line Sf21
    Kakumani PK, Chinnappan M, Singh AK, Malhotra P, Mukherjee SK, Bhatnagar RK
    PLoS One (2015) 10:e0116988