miRBase entry: ath-MIR10515

Stem-loop ath-MIR10515


Accession
MI0033661
Description
Arabidopsis thaliana ath-MIR10515 precursor miRNA


Sequence

guggugucgggggaccguuagggaaugauagaccgugaccccauucacgggcaaucucuaauauucauaACCCCGAUGGUUAUCCUCACCac
((((((..(((.(((((((.(((.((((((((((((((......))))))......))))....))))..))).))))))).))).))))))

Structure
      uc   g       a   -a    ----    ------      cc 
guggug  ggg gaccguu ggg  auga    uaga      ccguga  c
||||||  ||| ||||||| |||  ||||    ||||      ||||||   
caCCAC  CCU UUGGUAG CCC  uacu    aucu      ggcacu  c
      -U   A       C   Aa    uaua    cuaacg      ua 


Annotation confidence Not enough data
Do you think this miRNA is real?
Comments
Kong et al. refer to this sequence as miRID9 [1].

Genome context
chr5: 951338-951429 [-]

Database links

Mature ath-miR10515

Accession MIMAT0041984
Description Arabidopsis thaliana ath-miR10515 mature miRNA
Sequence 70 - ACCCCGAUGGUUAUCCUCACC - 90
Evidence experimental
Northern [1], RT-PCR [1]

References

  1. PubMed ID: 25552472
    A Novel Arabidopsis microRNA promotes IAA biosynthesis via the indole-3-acetaldoxime pathway by suppressing superroot1
    "Kong W, Li Y, Zhang M, Jin F, Li J"
    "Plant Cell Physiol (2015) 56:715-726