miRBase entry: tae-MIR10517

Stem-loop tae-MIR10517


Accession
MI0033663
Description
Triticum aestivum tae-MIR10517 precursor miRNA


Sequence

12 reads, 4 reads per million, 11 experiments
cggacgcagauucagugacauucccccgugacauucucggugACAUUCAGUCAUUGACAUgugggacccacaugugccuggacccacaugucagugacucaaugucaccgagaaugucacggggaaaugucaccg
..............((((((((.((((((((((((((((((((((((.(((((((((((((((((..(((........))).))))))))))))))))).)))))))))))))))))))))))).))))))))..

Structure
cggacgcagauuca        c                        C                 ac   cau 
              gugacauu ccccgugacauucucggugACAUU AGUCAUUGACAUguggg  cca   g
              |||||||| |||||||||||||||||||||||| |||||||||||||||||  |||    
              cacuguaa ggggcacuguaagagccacuguaa ucagugacuguacaccc  ggu   u
------------gc        a                        c                 -a   ccg 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tae-miR10517

Accession MIMAT0041986
Description Triticum aestivum tae-miR10517 mature miRNA
Sequence 43 - ACAUUCAGUCAUUGACAU - 60
Evidence experimental
Illumina [1], qRT-PCR [1]

References

  1. PubMed ID: 25480755
    Novel and conserved heat-responsive microRNAs in wheat (Triticum aestivum L.)
    "Kumar RR, Pathak H, Sharma SK, Kala YK, Nirjal MK, Singh GP, Goswami S, Rai RD"
    "Funct Integr Genomics (2015) 15:323-348