miRBase entry: tae-MIR10521

Stem-loop tae-MIR10521


Accession
MI0033667
Description
Triticum aestivum tae-MIR10521 precursor miRNA


Sequence

9 reads, 1 reads per million, 8 experiments
acauauauccagauucauaguacuagaauaugucauaucuaguccuagaUUCGUUUUUUAUAGGAUGGaaggaauauuguuuucuugaagaaacguguacucucuccguccuauaaaaaccaacauaguaccggaugugacacauucuauu
.......................((((((.((((((((((.((.(((..((.((((((.((((((((((.(((.(((((((((......)))))).))).))).)))))))))))))))).))..))).)).)))))))))).))))))..

Structure
acauauauccagauucauaguac      a          a  c   ga  C      U          a   a   -      cu 
                       uagaau ugucauaucu gu cua  UU GUUUUU AUAGGAUGGa gga uau uguuuu  u
                       |||||| |||||||||| || |||  || |||||| |||||||||| ||| ||| ||||||   
                       aucuua acaguguagg ca gau  aa caaaaa uauccugccu ucu aug gcaaag  g
---------------------uu      c          c  u   ac  c      -          c   c   u      aa 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature tae-miR10521

Accession MIMAT0041990
Description Triticum aestivum tae-miR10521 mature miRNA
Sequence 50 - UUCGUUUUUUAUAGGAUGG - 68
Evidence experimental
Illumina [1], qRT-PCR [1]

References

  1. PubMed ID: 25480755
    Novel and conserved heat-responsive microRNAs in wheat (Triticum aestivum L.)
    "Kumar RR, Pathak H, Sharma SK, Kala YK, Nirjal MK, Singh GP, Goswami S, Rai RD"
    "Funct Integr Genomics (2015) 15:323-348