Stem-loop sly-MIR7981a

Accession

MI0033703

Description

Solanum lycopersicum sly-MIR7981a precursor miRNA

Sequence

uuucuACCCCUUUUCGGCCUACGUGGCACuaacuugaaaaaaaagucaaccaacguugggccuacaagauagugucacguagaccgaaaagggguagaaaau
(((((((((((((((((.(((((((((((((.((((.........(((((....))))).....)))).))))))))))))).)))))))))))))))))..

Structure

--                 C             a    aaaaaaaag     c 
  uuucuACCCCUUUUCGG CUACGUGGCACua cuug         ucaac a
  ||||||||||||||||| ||||||||||||| ||||         |||||  
  aaagauggggaaaagcc gaugcacugugau gaac         gguug a
ua                 a             a    ----auccg     c 

Annotation confidence Not enough data

Genome context

chr5: 9815547-9815648 [+]

Mature sly-miR7981a

• Accession: MIMAT0042029
• Description: Solanum lycopersicum sly-miR7981a mature miRNA
• Sequence: 6 - ACCCCUUUUCGGCCUACGUGGCAC - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25218481
   Prediction and characterization of Tomato leaf curl New Delhi virus (ToLCNDV) responsive novel microRNAs in Solanum lycopersicum
   "Pradhan B, Naqvi AR, Saraf S, Mukherjee SK, Dey N"
   "Virus Res (2015) 195:183-195