miRBase entry: abu-mir-126

Stem-loop abu-mir-126


Accession
MI0033760
Description
Astatotilapia burtoni abu-mir-126 precursor miRNA


Sequence

CAUUAUUACUUUUGGUACGCGcuaugccacucucaacUCGUACCGUGAGUAAUAAUGCA
(((((((((((.(((((((.(...............).))))))).)))))))))))..

Structure
--           U       C cuaugc 
  CAUUAUUACUU UGGUACG G      c
  ||||||||||| ||||||| |      a
  GUAAUAAUGAG GCCAUGC c      c
AC           U       U aacucu 


Annotation confidence Not enough data
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Genome context
JH425339.1: 179266-179324 [+]

Database links

Mature abu-miR-126-5p

Accession MIMAT0042065
Description Astatotilapia burtoni abu-miR-126-5p mature miRNA
Sequence 1 - CAUUAUUACUUUUGGUACGCG - 21
Evidence experimental
Illumina [1]

Mature abu-miR-126-3p

Accession MIMAT0042066
Description Astatotilapia burtoni abu-miR-126-3p mature miRNA
Sequence 38 - UCGUACCGUGAGUAAUAAUGCA - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381