miRBase entry: abu-mir-206

Stem-loop abu-mir-206


Accession
MI0033791
Description
Astatotilapia burtoni abu-mir-206 precursor miRNA


Sequence

acaugcuuccuuauauccccauauuaauacgccacuuaUGGAAUGUAAGGAAGUGUGUGG
((((((((((((((((..(((((.............))))).))))))))))))))))..

Structure
--                cc     uuaau 
  acaugcuuccuuauau  ccaua     a
  ||||||||||||||||  |||||     c
  UGUGUGAAGGAAUGUA  GGUau     g
GG                -A     ucacc 


Annotation confidence Not enough data
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Genome context
JH425328.1: 2256328-2256387 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from abu-mir-206
Name Accession Chromosome Start End Strand Confidence




Database links

Mature abu-miR-206

Accession MIMAT0042094
Description Astatotilapia burtoni abu-miR-206 mature miRNA
Sequence 39 - UGGAAUGUAAGGAAGUGUGUGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381