miRBase entry: abu-mir-455-1

Stem-loop abu-mir-455-1


Accession
MI0033795
Description
Astatotilapia burtoni abu-mir-455-1 precursor miRNA


Sequence

UAUGUGCCCUUGGACUACAUCGuggaagccagcaccaugcaguccaugggcauauacac
(((((((((.((((((.(((.(((........))).))).)))))).)))))))))...

Structure
---         U      A   C   gaa 
   UAUGUGCCC UGGACU CAU Gug   g
   ||||||||| |||||| ||| |||    
   auauacggg accuga gua cac   c
cac         u      c   c   gac 


Annotation confidence Not enough data
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Genome context
JH425339.1: 2345720-2345778 [-]

Database links

Mature abu-miR-455

Accession MIMAT0042096
Description Astatotilapia burtoni abu-miR-455 mature miRNA
Sequence 1 - UAUGUGCCCUUGGACUACAUCG - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381