miRBase entry: abu-mir-129-2

Stem-loop abu-mir-129-2


Accession
MI0033829
Description
Astatotilapia burtoni abu-mir-129-2 precursor miRNA


Sequence

CUUUUUGCGGUCUGGGCUUGCugucaugugucuauccaggaagcccuuaccccaaaaagcau
(((((((.(((..((((((.(((.............))).))))))..))).)))))))...

Structure
---       C   CU      G   ucaug 
   CUUUUUG GGU  GGGCUU Cug     u
   ||||||| |||  |||||| |||     g
   gaaaaac cca  cccgaa gac     u
uac       c   uu      g   cuauc 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
JH425585.1: 216810-216871 [-]

Database links

Mature abu-miR-129

Accession MIMAT0042120
Description Astatotilapia burtoni abu-miR-129 mature miRNA
Sequence 1 - CUUUUUGCGGUCUGGGCUUGC - 21
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381