Stem-loop abu-mir-15a

Accession

MI0033848

Description

Astatotilapia burtoni abu-mir-15a precursor miRNA

Sequence

UAGCAGCACGGAAUGGUUUGUGgguuauacugagaugcaggccauacugugcugccgca
..(((((((((.((((((((((..(((...)))..)))))))))).)))))))))....

Structure

--UA         A          gg   u 
    GCAGCACGG AUGGUUUGUG  uua  
    ||||||||| ||||||||||  ||| a
    cgucguguc uaccggacgu  agu  
acgc         a          ag   c 

Annotation confidence Not enough data

Genome context

JH425654.1: 104882-104940 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-15a

Mature abu-miR-15a

• Accession: MIMAT0042135
• Description: Astatotilapia burtoni abu-miR-15a mature miRNA
• Sequence: 1 - UAGCAGCACGGAAUGGUUUGUG - 22
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25186727
   The genomic substrate for adaptive radiation in African cichlid fish
   "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
   "Nature (2014) 513:375-381