miRBase entry: abu-mir-22c

Stem-loop abu-mir-22c


Accession
MI0033865
Description
Astatotilapia burtoni abu-mir-22c precursor miRNA


Sequence

cguucuucacuggcuagcuuuaugucccacgccccacacuaAAGCUGCCAGUUGAAGAGCUGU
.(((((((((((((.((((((((((..........))).)))))))))))).))))))))...

Structure
--c        -     u       -   ccca 
   guucuuca cuggc agcuuua ugu    c
   |||||||| ||||| ||||||| |||     
   CGAGAAGU GACCG UCGAAau aca    g
UGU        U     -       c   cccc 


Annotation confidence Not enough data
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Genome context
JH425603.1: 350498-350560 [+]

Database links

Mature abu-miR-22c

Accession MIMAT0042150
Description Astatotilapia burtoni abu-miR-22c mature miRNA
Sequence 42 - AAGCUGCCAGUUGAAGAGCUGU - 63
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381