miRBase entry: abu-mir-365

Stem-loop abu-mir-365

Accession

MI0033870

Description

Astatotilapia burtoni abu-mir-365 precursor miRNA

Sequence

agggacuuuuaggggcagcuguguuuuauuaacccagucaUAAUGCCCCUAAAAAUCCUUAU
(((((.(((((((((((((((.(((.....))).)))).....))))))))))).)))))..

Structure

--     c           -----    u   u 
  aggga uuuuaggggca     gcug guu u
  ||||| |||||||||||     |||| ||| a
  UUCCU AAAAUCCCCGU     ugac caa u
UA     A           AAUac    c   u

Annotation confidence Not enough data

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Genome context

JH425525.1: 560211-560272 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from abu-mir-365

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature abu-miR-365

Accession	MIMAT0042154
Description	Astatotilapia burtoni abu-miR-365 mature miRNA
Sequence	41 - UAAUGCCCCUAAAAAUCCUUAU - 62
Evidence	experimental Illumina [1]

References

PubMed ID: 25186727
The genomic substrate for adaptive radiation in African cichlid fish
"Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
"Nature (2014) 513:375-381