miRBase entry: abu-mir-155

Stem-loop abu-mir-155


Accession
MI0033871
Description
Astatotilapia burtoni abu-mir-155 precursor miRNA


Sequence

UUAAUGCUAAUCGUGAUAGGGGUuguucuuauuaacagacaccuaacauguuagcauuagcu
((((((((((.((((.(((((..((((......))))..).)))).))))))))))))))..

Structure
--          U    A    - GU    cu 
  UUAAUGCUAA CGUG UAGG G  uguu  u
  |||||||||| |||| |||| |  ||||   
  gauuacgauu guac aucc c  acaa  a
uc          -    a    a ag    uu 


Annotation confidence Not enough data
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Genome context
JH425469.1: 916945-917006 [+]

Database links

Mature abu-miR-155

Accession MIMAT0042155
Description Astatotilapia burtoni abu-miR-155 mature miRNA
Sequence 1 - UUAAUGCUAAUCGUGAUAGGGGU - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 25186727
    The genomic substrate for adaptive radiation in African cichlid fish
    "Brawand D, Wagner CE, Li YI, Malinsky M, Keller I, Fan S, Simakov O, Ng AY, Lim ZW, Bezault E, Turner-Maier J, Johnson J, Alcazar R, Noh HJ, Russell P, Aken B, Alfoldi J, Amemiya C, Azzouzi N, Baroiller JF, Barloy-Hubler F, Berlin A, Bloomquist R, Carleto"
    "Nature (2014) 513:375-381